34 lines
1.4 KiB
Markdown
34 lines
1.4 KiB
Markdown
# Julia_msi_GUI<br />
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A Graphical User Interface for MSI in Julia: https://github.com/CINVESTAV-LABI/julia_mzML_imzML
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## Local Installation
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1. Make sure you have Julia installed, if not, follow the next installation guide for [juliaup](https://github.com/JuliaLang/juliaup) (recommended) or [julia](https://julialang.org/downloads/platform/)
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2. Access the repository using this link:<br>
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https://github.com/Pixelguy14/Julia_msi_GUI<br>
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click "<b><> Code</b>" button then hit "<b>Download ZIP</b>"<br>
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unzip the file in your desired location<br>
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## Load User Interface
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1. Set working directory to Julia_msi_GUI (this repository) in your terminal using:<br>
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Linux:
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```
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cd PathToRepository/Julia_msi_GUI-main
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```
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Windows/Mac:
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```
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cd PathToRepository\Julia_msi_GUI-main
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```
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2. Launch the Julia project in your terminal using:
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```
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julia --project=. start_MSI_GUI.jl
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```
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3. After the script has finished loading, You can open a page (http://127.0.0.1:1481/) in your browser with the web app running.
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Additional notes:<br>
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After the first boot initializes the packages in your computer, subsequent uses of the app should take less time to load.<br>
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Recomended system requirements: 4 core processor, 8 GB ram<br>
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## Example data
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Robert Winkler. (2023). mzML mass spectrometry and imzML mass spectrometry imaging test data [Data set].
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Zenodo. <https://doi.org/10.5281/zenodo.10084132> |