Pixelguy14
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39fe2bf52c
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UI now has support for mzml to imzml conversion, made small optimizations to the src folder's API to improve performance
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2025-10-16 10:49:16 -06:00 |
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Pixelguy14
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2fd2b90513
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altered imzML parser to be compatible with timsconverter, small improvements on the UI, other small bug fixes done
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2025-10-13 22:05:56 -06:00 |
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Pixelguy14
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f35acd1d0f
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updated functions to iterate faster to create imzml images (find_mass, get_mz_slice, _iterate_spectra_fast, get_total_spectrum) metadata adquisition and saving, updated docstrings, started work for parser to detect 4 cases, profile uncompressed (current), profile compressed, centroid uncompressed, centroid compressed
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2025-10-09 12:00:00 -06:00 |
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Pixelguy14
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7a0360ef68
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added docstrings to most functions in the src folder, altered msi data calculations for fast iterators, improved total spectrumtimes, added closer colorbar bin calculations, plus more small changes
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2025-10-06 14:58:37 -06:00 |
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Pixelguy14
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22c8d9637b
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integrated MSI_src API into the UI, fixed interface elements, made some processes asynchronous, modified spectrum plots, added sum spectrum, removed use of obsolete julia_mzML_imzML library
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2025-10-02 13:28:15 -06:00 |
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Pixelguy14
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cd1115368f
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finished test script, included instructions in test/readme.md, the test performs mzml, imzml and conversion tests, along with throwing reference plots and images which result from the files
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2025-09-29 10:57:11 -06:00 |
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Pixelguy14
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b1d7838a60
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Implemented imzml and mzml lazy loading, imzml to load spectra matrix, working on mzml to imzml
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2025-09-25 10:42:33 -06:00 |
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Pixelguy14
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710c74a6c4
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Made readme instructions clearer
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2025-04-10 11:14:04 -06:00 |
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Robert Winkler
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bca4a3c31e
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MIT license added.
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2025-03-20 11:24:01 -06:00 |
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Robert Winkler
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86db0bf03a
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MIT license added.
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2025-03-20 11:20:26 -06:00 |
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Pixelguy14
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074186573c
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Renamed to JuliaMSI
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2025-03-19 09:50:27 -06:00 |
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Pixelguy14
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2bd2e819a4
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Concept error in Sum spectrum, changed to Mean spectrum
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2025-03-13 13:49:49 -06:00 |
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Pixelguy14
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8e1c473acb
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median filter border fix, files get renamed if they don't have correct extension
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2025-03-09 14:02:53 -06:00 |
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Pixelguy14
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421d594b99
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Added test data link in Readme, fixed typo
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2025-03-05 12:29:12 -06:00 |
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Pixelguy14
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3714b404cd
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Fixed scales on plots Topography, Surface and axis on spectrum
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2025-02-20 15:22:54 -06:00 |
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Pixelguy14
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0456abb70b
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Smaller changes to the styling, altered topology layout to use more space
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2025-02-19 21:19:20 -06:00 |
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Pixelguy14
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14af947433
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Minor text corrections, file loading corrections
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2025-02-19 11:32:34 -06:00 |
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Pixelguy14
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e63f9e29e5
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SUM spectrum now loads when loading mzML
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2025-02-15 17:58:39 -06:00 |
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Pixelguy14
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e3e987f0cd
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Fixed some errors to get ready for release
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2025-02-15 15:40:13 -06:00 |
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Pixelguy14
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455d88cbb7
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Included environment variable to set up production, fixed plot errors and optical image load, started mzML to imzML function
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2025-02-13 15:34:13 -06:00 |
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Pixelguy14
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2b6ec4937f
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Fixed bounding error in the median filter application
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2025-02-10 18:41:26 -06:00 |
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Pixelguy14
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63c7428214
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Implemented an experimental executable for all systems, fixed a few errors, implemented first try for a median filter for the slices in Julia
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2025-02-10 15:34:30 -06:00 |
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Pixelguy14
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59630bdd95
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Now the comparative view offers more options to compare to, fixed small mistakes
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2025-02-08 18:36:49 -06:00 |
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Pixelguy14
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47bba11f15
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Small fixes regarding the spectra, topographic and surface plots
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2025-02-06 15:24:29 -06:00 |
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Pixelguy14
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fe6508ead8
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added better margins for image views, implemented upload of optical image and transparency slider
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2025-02-03 22:53:08 -06:00 |
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José Julián Sierra Álvarez
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09d680db87
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Merge pull request #7 from Pixelguy14/Experimental_ColorLevels
Experimental color levels done
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2025-01-30 18:18:53 -06:00 |
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Pixelguy14
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11349330a4
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colorbar scale for both with triq filter and without is finished
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2025-01-30 18:17:32 -06:00 |
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Pixelguy14
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fdd625d3e0
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Bitmap is now normalized in creation, which evenly distributes colors of the colorTable better, now IntQuant allows for coloLevel adjustments
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2025-01-30 00:40:01 -06:00 |
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Pixelguy14
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df0d82910b
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Alternative versions of SaveBitMap and IntQuant for adjustments to the color level input
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2025-01-29 15:55:30 -06:00 |
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Pixelguy14
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4ea5d8e119
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Now the file picker allows for mzML choosing, minor changes to the colorbarplots
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2025-01-28 00:11:19 -06:00 |
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Pixelguy14
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e5e6284d53
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first patch to fix colorbar coherence with R
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2025-01-27 18:10:44 -06:00 |
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Pixelguy14
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7667bc26e9
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Images are now plots, now you can select the pixel of the plot to create a spectra according to those coordenates, gave more clearness to the code by creating functions for some processes
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2025-01-26 13:48:18 -06:00 |
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Pixelguy14
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b660d7defb
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Minor fixes
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2025-01-23 12:45:48 -06:00 |
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Pixelguy14
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09e4a015e0
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Added plot interaction to the UI, improved boot loading, modified UI to accomodate for these changes
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2025-01-22 23:58:06 -06:00 |
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Pixelguy14
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bf50d0cb0c
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started the inclusion of click interaction for plots
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2025-01-20 16:24:19 -06:00 |
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Pixelguy14
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b913bf5117
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minor fixes regarding colorbarplot
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2025-01-20 15:39:44 -06:00 |
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Pixelguy14
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d18b113641
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added time measurements for main functions of the app
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2025-01-19 17:07:04 -06:00 |
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Pixelguy14
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c92576d5a5
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Finished tabs and compare views, added file search to ease access to files, corrected minimal fixes
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2025-01-16 16:22:32 -06:00 |
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Pixelguy14
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ddc690b659
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make buttons disabled when other process is running, added tabs, added comparative view, added rotation to taller images
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2025-01-15 21:15:02 -06:00 |
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Pixelguy14
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13a5f7f222
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3d plot fixes and UI corrections
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2025-01-15 15:45:03 -06:00 |
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Pixelguy14
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e3cd15157e
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fixed genie package install
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2025-01-15 11:38:49 -06:00 |
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Pixelguy14
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645d569f03
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Finished the 3d plot topology for images, added contour plots for images, added algebra, fixed image vertical flipping, experimental changes for a faster first boot
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2025-01-14 20:57:42 -06:00 |
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Pixelguy14
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c2ffbc8275
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3d plot contours, fixed startup script
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2025-01-13 12:50:57 -06:00 |
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Pixelguy14
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e5b796fce0
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Better image search, 3d images ongoing
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2025-01-13 00:56:12 -06:00 |
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Pixelguy14
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04f7a107da
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Quicker start for the app, better UI, More responsiveness, code cleaning, and more readability for the code
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2025-01-11 22:14:24 -06:00 |
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Pixelguy14
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d30b5d173b
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Set maximum height to images to avoid extension of page size
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2024-11-06 14:13:54 -06:00 |
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José Julián Sierra Álvarez
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1dd7eed839
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Merge pull request #6 from Pixelguy14/test/multiplataform
Test for multiplatform implementation
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2024-10-18 10:32:26 -06:00 |
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ING-HGA
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c0418c4ff0
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Update README.md
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2024-10-17 16:53:04 -06:00 |
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José Julián Sierra Álvarez
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72cb64e731
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Testing condition to avoid errors in macOS
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2024-10-12 11:18:22 -06:00 |
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ING-HGA
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faca7c82cb
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Update README.md
Still working
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2024-10-07 16:13:48 -06:00 |
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