34 lines
1.0 KiB
Julia
34 lines
1.0 KiB
Julia
module MSI_src
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# Export the public API
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export OpenMSIData, GetSpectrum, IterateSpectra, ImportMzmlFile, load_slices, plot_slices, plot_slice, get_total_spectrum, get_average_spectrum, LoadMzml, LoadSpectra, precompute_analytics
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# Include all source files directly into the main module
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include("MSIData.jl")
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include("ParserHelpers.jl")
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include("mzML.jl")
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include("imzML.jl")
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include("MzmlConverter.jl")
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# --- Main Entry Point --- #
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"""
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OpenMSIData(filepath::String; cache_size=100)
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Opens a .mzML or .imzML file and prepares it for data access.
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This is the main entry point for the new data access API.
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"""
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function OpenMSIData(filepath::String; cache_size=300)
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if endswith(lowercase(filepath), ".mzml")
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return load_mzml_lazy(filepath, cache_size=cache_size)
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elseif endswith(lowercase(filepath), ".imzml")
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return load_imzml_lazy(filepath, cache_size=cache_size)
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else
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error("Unsupported file type: $filepath. Please provide a .mzML or .imzML file.")
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end
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end
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end # module MSI_src
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