9 Commits

Author SHA1 Message Date
Pixelguy14
edfbb77f58 Added bloom filters custom API, thread safety for multithreading several important functions, streaming processing to reduce GC and Memory allocations calls, buffer pool changed with lock safety, and debug memory monitoring to track leaks, alongside better loading times in general 2025-11-09 13:41:29 -06:00
Pixelguy14
a8c2dfcc91 Implementing foundations for multithreading, standarized mzml converter, profile/centroid detection per pixel, memory-efficient buffer reuse, added preparations to bloom filter alongside buffer pulling, removed memory leaks on linux due to @async macro used on @app module, better error management 2025-11-06 16:43:34 -06:00
Pixelguy14
3439a8a4dd Added mask interface accessible from the UI, with it you can create slices from your masks or your images of the samples, included masking in the main processing, on the spectra creation, and on the 3d surface plot, started with interface for pre processing spectral data 2025-11-04 17:20:05 -06:00
Pixelguy14
39fe2bf52c UI now has support for mzml to imzml conversion, made small optimizations to the src folder's API to improve performance 2025-10-16 10:49:16 -06:00
Pixelguy14
2fd2b90513 altered imzML parser to be compatible with timsconverter, small improvements on the UI, other small bug fixes done 2025-10-13 22:05:56 -06:00
Pixelguy14
f35acd1d0f updated functions to iterate faster to create imzml images (find_mass, get_mz_slice, _iterate_spectra_fast, get_total_spectrum) metadata adquisition and saving, updated docstrings, started work for parser to detect 4 cases, profile uncompressed (current), profile compressed, centroid uncompressed, centroid compressed 2025-10-09 12:00:00 -06:00
Pixelguy14
7a0360ef68 added docstrings to most functions in the src folder, altered msi data calculations for fast iterators, improved total spectrumtimes, added closer colorbar bin calculations, plus more small changes 2025-10-06 14:58:37 -06:00
Pixelguy14
22c8d9637b integrated MSI_src API into the UI, fixed interface elements, made some processes asynchronous, modified spectrum plots, added sum spectrum, removed use of obsolete julia_mzML_imzML library 2025-10-02 13:28:15 -06:00
Pixelguy14
cd1115368f finished test script, included instructions in test/readme.md, the test performs mzml, imzml and conversion tests, along with throwing reference plots and images which result from the files 2025-09-29 10:57:11 -06:00