Pixelguy14
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11c181b3b3
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Interface ready for preprocessing steps handling. style altered to support modular preprocessing pipeline, finished precalculations and preprocessing code, and its respective testing script, added preprocessingpipeline, a handler for the low level functions of preprocessing to work with the high level MSIData in the genie environment.
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2025-11-29 21:47:51 -06:00 |
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Pixelguy14
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bdd9315796
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Fixed preprocessing module, implemented precalculations, this code gives a prediction of the values for the parameters in every step for preprocessing, added test suites for both the parameter generation and the preprocessing pipeline, included a descriptive processing that returns an image with what every parameter does in every step, added instrument metadata structure with the parser for each type of file, to retrieve several important parameters to automate precalculations and preprocessing
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2025-11-25 12:53:57 -06:00 |
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Pixelguy14
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edfbb77f58
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Added bloom filters custom API, thread safety for multithreading several important functions, streaming processing to reduce GC and Memory allocations calls, buffer pool changed with lock safety, and debug memory monitoring to track leaks, alongside better loading times in general
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2025-11-09 13:41:29 -06:00 |
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Pixelguy14
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a8c2dfcc91
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Implementing foundations for multithreading, standarized mzml converter, profile/centroid detection per pixel, memory-efficient buffer reuse, added preparations to bloom filter alongside buffer pulling, removed memory leaks on linux due to @async macro used on @app module, better error management
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2025-11-06 16:43:34 -06:00 |
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Pixelguy14
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39c92ba850
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bulk and batch processing for multiple imzml and multiple m/z is now available, folder organization for imzml slices in public folder, JSON tracking of processed datasets to save memory time, multiple performance optimizations and UI bug fixes, metadata viewing for all processed files, comparative view between multiple datasets
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2025-10-21 11:56:15 -06:00 |
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Pixelguy14
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39fe2bf52c
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UI now has support for mzml to imzml conversion, made small optimizations to the src folder's API to improve performance
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2025-10-16 10:49:16 -06:00 |
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Pixelguy14
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7a0360ef68
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added docstrings to most functions in the src folder, altered msi data calculations for fast iterators, improved total spectrumtimes, added closer colorbar bin calculations, plus more small changes
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2025-10-06 14:58:37 -06:00 |
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Pixelguy14
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cd1115368f
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finished test script, included instructions in test/readme.md, the test performs mzml, imzml and conversion tests, along with throwing reference plots and images which result from the files
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2025-09-29 10:57:11 -06:00 |
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Pixelguy14
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b1d7838a60
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Implemented imzml and mzml lazy loading, imzml to load spectra matrix, working on mzml to imzml
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2025-09-25 10:42:33 -06:00 |
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