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Fixed the functionality of plot for the imzML file

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It now plots correctly
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José Julián Sierra Álvarez 2024-09-11 11:32:06 -06:00 committed by GitHub
parent 642d2044cd
commit e5824dd858
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GPG Key ID: B5690EEEBB952194
1 changed files with 3 additions and 2 deletions
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5
app.jl
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@ -96,6 +96,7 @@ using julia_mzML_imzML
if isfile(full_route) && Nmass > 0 && Tol > 0 && Tol <= 1 if isfile(full_route) && Nmass > 0 && Tol > 0 && Tol <= 1
msg = "File exists, Nmass=$(Nmass) Tol=$(Tol). Please do not press the start button until confirmation" msg = "File exists, Nmass=$(Nmass) Tol=$(Tol). Please do not press the start button until confirmation"
spectra = LoadImzml(full_route) spectra = LoadImzml(full_route)
spectraMz = LoadMzml(full_route)
msg = "File loaded. Please do not press the start button until confirmation" msg = "File loaded. Please do not press the start button until confirmation"
slice = GetSlice(spectra, Nmass, Tol) slice = GetSlice(spectra, Nmass, Tol)
if triqProb != 0 # if we have TrIQ if triqProb != 0 # if we have TrIQ
@ -118,7 +119,7 @@ using julia_mzML_imzML
msgimg = "image with the Nmass of $(Int(Nmass))" msgimg = "image with the Nmass of $(Int(Nmass))"
end end
msg = "The file has been created inside the 'public' folder of the app" msg = "The file has been created inside the 'public' folder of the app"
traceSpectra = PlotlyBase.scatter(x = spectra[1, 4], y = spectra[2, 4], mode="lines+markers") traceSpectra = PlotlyBase.scatter(x = spectraMz[1, 1], y = spectraMz[2, 1], mode="lines+markers")
plotdata = [traceSpectra] # we add the data of spectra to the plot plotdata = [traceSpectra] # we add the data of spectra to the plot
else else
msg = "File does not exist or a parameter was not well inputted" msg = "File does not exist or a parameter was not well inputted"
@ -191,4 +192,4 @@ This is useful for storing data that is unique to each user session but is not n
in the UI. in the UI.
@private table = DataFrame(a = 1:10, b = 10:19, c = 20:29) @private table = DataFrame(a = 1:10, b = 10:19, c = 20:29)
=# =#