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README.md
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README.md
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# Julia_msi_GUI<br />
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# Julia_msi_GUI<br />
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A Graphical User Interface created with <i>Julia Genie Builder</i> made for to assist in the use of this repository: https://github.com/CINVESTAV-LABI/julia_mzML_imzML which generates images with the mzMl, imzML and ibd files.<br />
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A Graphical User Interface for IMS in Julia: https://github.com/CINVESTAV-LABI/julia_mzML_imzML
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For the correct implementation and use of this repository one must insert the next lines just as they are depicted in your <b>Julia</b> terminal to install the dependencies needed, this part is only needed once. <br />
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## Local installation
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* Launch Julia
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```
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```
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julia
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julia
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```
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```
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press closing square bracket:
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* Enter Pkg mode by pressing the close square bracket once Julia has been loaded: ** Mostrar imagen del modo pkg**
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```
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```
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]
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]
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```
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```
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To enter Pkg mode, and then add the next libraries:
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* Install the following libraries
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```
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```
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add Pkg Libz ; add https://github.com/CINVESTAV-LABI/julia_mzML_imzML ; add PlotlyBase ; add Statistics ; add CairoMakie ; add Colors ; add Genie
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add Pkg Libz ; add https://github.com/CINVESTAV-LABI/julia_mzML_imzML ; add PlotlyBase ; add Statistics ; add CairoMakie ; add Colors ; add Genie
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```
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```
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Then open a <b>Julia</b> terminal on the directory <i>"Julia_msi_GUI"</i> and put the next code, this is needed every time you want to run the GUI: <br />
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*In the Pkg mode (enter by pressing "]" once Julia is rining) enter:
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```
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]
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```
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To enter Pkg mode again, then paste the next lines:
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```
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```
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activate .
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activate .
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```
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```
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Press backspace key to exit Pkg mode and continue with:
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* Get out from Pkg mode by pressing the backspace key and enter next line:
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```
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```
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using Genie ; Genie.loadapp() ; up()
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using Genie ; Genie.loadapp() ; up()
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```
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```
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