Julian/JuliaMSI
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity

added time measurements for main functions of the app

Browse Source
This commit is contained in:
Pixelguy14 2025-01-19 17:07:04 -06:00
parent c92576d5a5
commit d18b113641
4 changed files with 85 additions and 75 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

20
Manifest.toml
View File

@ -184,9 +184,9 @@ version = "1.1.1"
[[deps.CairoMakie]] [[deps.CairoMakie]]
deps = ["CRC32c", "Cairo", "Cairo_jll", "Colors", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"] deps = ["CRC32c", "Cairo", "Cairo_jll", "Colors", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"]
git-tree-sha1 = "77bc0964dd77811630e6c3329536a86b3b965cba" git-tree-sha1 = "6d76f05dbc8b7a52deaa7cdabe901735ae7b6724"
uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0" uuid = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
version = "0.13.0" version = "0.13.1"
[[deps.Cairo_jll]] [[deps.Cairo_jll]]
deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"] deps = ["Artifacts", "Bzip2_jll", "CompilerSupportLibraries_jll", "Fontconfig_jll", "FreeType2_jll", "Glib_jll", "JLLWrappers", "LZO_jll", "Libdl", "Pixman_jll", "Xorg_libXext_jll", "Xorg_libXrender_jll", "Zlib_jll", "libpng_jll"]
@ -418,9 +418,9 @@ version = "1.11.0"
[[deps.Distributions]] [[deps.Distributions]]
deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"] deps = ["AliasTables", "FillArrays", "LinearAlgebra", "PDMats", "Printf", "QuadGK", "Random", "SpecialFunctions", "Statistics", "StatsAPI", "StatsBase", "StatsFuns"]
git-tree-sha1 = "7901a6117656e29fa2c74a58adb682f380922c47" git-tree-sha1 = "03aa5d44647eaec98e1920635cdfed5d5560a8b9"
uuid = "31c24e10-a181-5473-b8eb-7969acd0382f" uuid = "31c24e10-a181-5473-b8eb-7969acd0382f"
version = "0.25.116" version = "0.25.117"
[deps.Distributions.extensions] [deps.Distributions.extensions]
DistributionsChainRulesCoreExt = "ChainRulesCore" DistributionsChainRulesCoreExt = "ChainRulesCore"
@ -1361,9 +1361,9 @@ version = "0.5.15"
[[deps.Makie]] [[deps.Makie]]
deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Dates", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Format", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageBase", "ImageIO", "InteractiveUtils", "Interpolations", "IntervalSets", "InverseFunctions", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "PNGFiles", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun", "Unitful"] deps = ["Animations", "Base64", "CRC32c", "ColorBrewer", "ColorSchemes", "ColorTypes", "Colors", "Contour", "Dates", "DelaunayTriangulation", "Distributions", "DocStringExtensions", "Downloads", "FFMPEG_jll", "FileIO", "FilePaths", "FixedPointNumbers", "Format", "FreeType", "FreeTypeAbstraction", "GeometryBasics", "GridLayoutBase", "ImageBase", "ImageIO", "InteractiveUtils", "Interpolations", "IntervalSets", "InverseFunctions", "Isoband", "KernelDensity", "LaTeXStrings", "LinearAlgebra", "MacroTools", "MakieCore", "Markdown", "MathTeXEngine", "Observables", "OffsetArrays", "PNGFiles", "Packing", "PlotUtils", "PolygonOps", "PrecompileTools", "Printf", "REPL", "Random", "RelocatableFolders", "Scratch", "ShaderAbstractions", "Showoff", "SignedDistanceFields", "SparseArrays", "Statistics", "StatsBase", "StatsFuns", "StructArrays", "TriplotBase", "UnicodeFun", "Unitful"]
git-tree-sha1 = "021b6b64b68f6ee09fb35a1528a2b5a7f48ac00c" git-tree-sha1 = "9680336a5b67f9f9f6eaa018f426043a8cd68200"
uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a" uuid = "ee78f7c6-11fb-53f2-987a-cfe4a2b5a57a"
version = "0.22.0" version = "0.22.1"
[[deps.MakieCore]] [[deps.MakieCore]]
deps = ["ColorTypes", "GeometryBasics", "IntervalSets", "Observables"] deps = ["ColorTypes", "GeometryBasics", "IntervalSets", "Observables"]
@ -1603,9 +1603,9 @@ version = "10.42.0+1"
[[deps.PDMats]] [[deps.PDMats]]
deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"] deps = ["LinearAlgebra", "SparseArrays", "SuiteSparse"]
git-tree-sha1 = "949347156c25054de2db3b166c52ac4728cbad65" git-tree-sha1 = "966b85253e959ea89c53a9abebbf2e964fbf593b"
uuid = "90014a1f-27ba-587c-ab20-58faa44d9150" uuid = "90014a1f-27ba-587c-ab20-58faa44d9150"
version = "0.11.31" version = "0.11.32"
[[deps.PNGFiles]] [[deps.PNGFiles]]
deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"] deps = ["Base64", "CEnum", "ImageCore", "IndirectArrays", "OffsetArrays", "libpng_jll"]
@ -2317,9 +2317,9 @@ uuid = "3bb67fe8-82b1-5028-8e26-92a6c54297fa"
version = "0.11.3" version = "0.11.3"
[[deps.Tricks]] [[deps.Tricks]]
git-tree-sha1 = "7822b97e99a1672bfb1b49b668a6d46d58d8cbcb" git-tree-sha1 = "6cae795a5a9313bbb4f60683f7263318fc7d1505"
uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775" uuid = "410a4b4d-49e4-4fbc-ab6d-cb71b17b3775"
version = "0.1.9" version = "0.1.10"
[[deps.TriplotBase]] [[deps.TriplotBase]]
git-tree-sha1 = "4d4ed7f294cda19382ff7de4c137d24d16adc89b" git-tree-sha1 = "4d4ed7f294cda19382ff7de4c137d24d16adc89b"

90
app.jl
View File

@ -11,7 +11,7 @@ using Statistics
using NaturalSort using NaturalSort
using Images using Images
using LinearAlgebra using LinearAlgebra
using NativeFileDialog using NativeFileDialog # Opens the file explorer depending on the OS
@genietools @genietools
# == Code import == # == Code import ==
@ -69,10 +69,10 @@ end
@in triqProb=0.98 @in triqProb=0.98
@in triqColor=256 @in triqColor=256
# Interface Buttons # Interface Buttons and Validations
@in btnSearch=false # To search for files in your device @in btnSearch=false # To search for files in your device
@in mainProcess=false # To generate images @in mainProcess=false # To generate images
@in CompareBtn=false # to open dialog @in compareBtn=false # To open dialog
@in createSumPlot=false # To generate sum spectrum plot @in createSumPlot=false # To generate sum spectrum plot
@in image3dPlot=false # To generate 3d plot based on current image @in image3dPlot=false # To generate 3d plot based on current image
@in triq3dPlot=false # To generate 3d plot based on current triq image @in triq3dPlot=false # To generate 3d plot based on current triq image
@ -81,12 +81,12 @@ end
@in progress=false @in progress=false
@in progressPlot=false @in progressPlot=false
@in triqEnabled=false @in triqEnabled=false
@in ImgPlus=false @in imgPlus=false
@in ImgMinus=false @in imgMinus=false
@in ImgPlusT=false @in imgPlusT=false
@in ImgMinusT=false @in imgMinusT=false
#TABS # TAB variables
@out tabIDs=["tab0","tab1","tab2","tab3","tab4"] @out tabIDs=["tab0","tab1","tab2","tab3","tab4"]
@out tabLabels=["Image", "TrIQ", "Spectrum Plot", "Topology Plot","Surface Plot"] @out tabLabels=["Image", "TrIQ", "Spectrum Plot", "Topology Plot","Surface Plot"]
@in selectedTab= "tab0" @in selectedTab= "tab0"
@ -100,10 +100,12 @@ end
@out colorbar="/.png" @out colorbar="/.png"
@out colorbarT="/.png" @out colorbarT="/.png"
# Messages to interface Variables
@out msg="" @out msg=""
@out msgimg="" @out msgimg=""
@out msgtriq="" @out msgtriq=""
# Saves the route where imzML and mzML files are located
@out full_route="" @out full_route=""
@out full_routeMz="" @out full_routeMz=""
@out full_routeMz2="" @out full_routeMz2=""
@ -111,23 +113,22 @@ end
# For the creation of images with a more specific mass charge # For the creation of images with a more specific mass charge
@out text_nmass="" @out text_nmass=""
# For image search # For image search image lists we apply a filter that searches specific type of images into our public folder, then we sort it in a "numerical" order
# Image lists we apply a filter that searches specific type of images into our public folder, then we sort it in a "numerical" order
@in msi_bmp=sort(filter(filename -> startswith(filename, "MSI_") && endswith(filename, ".bmp"), readdir("public")),lt=natural) @in msi_bmp=sort(filter(filename -> startswith(filename, "MSI_") && endswith(filename, ".bmp"), readdir("public")),lt=natural)
@in col_msi_png=sort(filter(filename -> startswith(filename, "colorbar_MSI_") && endswith(filename, ".png"), readdir("public")),lt=natural) @in col_msi_png=sort(filter(filename -> startswith(filename, "colorbar_MSI_") && endswith(filename, ".png"), readdir("public")),lt=natural)
@in triq_bmp=sort(filter(filename -> startswith(filename, "TrIQ_") && endswith(filename, ".bmp"), readdir("public")),lt=natural) @in triq_bmp=sort(filter(filename -> startswith(filename, "TrIQ_") && endswith(filename, ".bmp"), readdir("public")),lt=natural)
@in col_triq_png=sort(filter(filename -> startswith(filename, "colorbar_TrIQ_") && endswith(filename, ".png"), readdir("public")),lt=natural) @in col_triq_png=sort(filter(filename -> startswith(filename, "colorbar_TrIQ_") && endswith(filename, ".png"), readdir("public")),lt=natural)
# Set current image for the list
# Set current image for the list to display
@out current_msi="" @out current_msi=""
@out current_col_msi="" @out current_col_msi=""
@out current_triq="" @out current_triq=""
@out current_col_triq="" @out current_col_triq=""
@out indeximg=0 # Starting and finishing times to measure how long it takes for a function to finish in elapse time
@out indeximgTriq=0 @out sTime=time()
@out fTime=time()
@out lastimg=0 @out eTime=time()
@out lastimgTriq=0
# Interface Plot Spectrum # Interface Plot Spectrum
layoutSpectra=PlotlyBase.Layout( layoutSpectra=PlotlyBase.Layout(
@ -220,21 +221,12 @@ end
end end
end end
"""
@onchange Nmass begin
indeximg=floor(Int, Nmass)
indeximgTriq=floor(Int, Nmass)
lastimg=floor(Int, Nmass)
lastimgTriq=floor(Int, Nmass)
end
"""
@onbutton mainProcess begin @onbutton mainProcess begin
progress=true # Start progress button animation progress=true # Start progress button animation
btnStartDisable=true # We disable the button to avoid multiple requests btnStartDisable=true # We disable the button to avoid multiple requests
btnPlotDisable=true btnPlotDisable=true
indeximg=floor(Int, Nmass)
text_nmass=replace(string(Nmass), "." => "_") text_nmass=replace(string(Nmass), "." => "_")
sTime=time()
#full_route=joinpath(file_route, file_name) #full_route=joinpath(file_route, file_name)
if isfile(full_route) && Nmass > 0 && Tol > 0 && Tol <= 1 if isfile(full_route) && Nmass > 0 && Tol > 0 && Tol <= 1
msg="File exists, Nmass=$(Nmass) Tol=$(Tol). Loading file will begin, please be patient." msg="File exists, Nmass=$(Nmass) Tol=$(Tol). Loading file will begin, please be patient."
@ -274,7 +266,9 @@ end
# We update the directory to include the new placed images. # We update the directory to include the new placed images.
triq_bmp=sort(filter(filename -> startswith(filename, "TrIQ_") && endswith(filename, ".bmp"), readdir("public")),lt=natural) triq_bmp=sort(filter(filename -> startswith(filename, "TrIQ_") && endswith(filename, ".bmp"), readdir("public")),lt=natural)
col_triq_png=sort(filter(filename -> startswith(filename, "colorbar_TrIQ_") && endswith(filename, ".png"), readdir("public")),lt=natural) col_triq_png=sort(filter(filename -> startswith(filename, "colorbar_TrIQ_") && endswith(filename, ".png"), readdir("public")),lt=natural)
msg="The file has been created successfully inside the 'public' folder of the app." fTime=time()
eTime=round(fTime-sTime,digits=3)
msg="The file has been created in $(eTime) seconds successfully inside the 'public' folder of the app"
selectedTab="tab1" selectedTab="tab1"
#println("all msi in folder=",triq_bmp) #println("all msi in folder=",triq_bmp)
#println("all col msi in folder= ",col_triq_png) #println("all col msi in folder= ",col_triq_png)
@ -305,7 +299,9 @@ end
msi_bmp=sort(filter(filename -> startswith(filename, "MSI_") && endswith(filename, ".bmp"), readdir("public")),lt=natural) msi_bmp=sort(filter(filename -> startswith(filename, "MSI_") && endswith(filename, ".bmp"), readdir("public")),lt=natural)
col_msi_png=sort(filter(filename -> startswith(filename, "colorbar_MSI_") && endswith(filename, ".png"), readdir("public")),lt=natural) col_msi_png=sort(filter(filename -> startswith(filename, "colorbar_MSI_") && endswith(filename, ".png"), readdir("public")),lt=natural)
selectedTab="tab0" selectedTab="tab0"
msg="The file has been created successfully inside the 'public' folder of the app." fTime=time()
eTime=round(fTime-sTime,digits=3)
msg="The file has been created in $(eTime) seconds successfully inside the 'public' folder of the app"
#println("all msi in folder=",msi_bmp) #println("all msi in folder=",msi_bmp)
#println("all col msi in folder= ",col_msi_png) #println("all col msi in folder= ",col_msi_png)
end end
@ -330,13 +326,13 @@ end
@onbutton createSumPlot begin @onbutton createSumPlot begin
msg="Sum spectrum plot selected" msg="Sum spectrum plot selected"
sTime=time()
#full_route=joinpath( file_route, file_name ) #full_route=joinpath( file_route, file_name )
if isfile(full_route) # Check if the file exists if isfile(full_route) # Check if the file exists
btnPlotDisable=false btnPlotDisable=false
btnStartDisable=false btnStartDisable=false
full_routeMz=split( full_route, "." )[1] * ".mzML" # Splitting the route from imzml to mzml so the plotting can work full_routeMz=split( full_route, "." )[1] * ".mzML" # Splitting the route from imzml to mzml so the plotting can work
if isfile(full_routeMz) && (full_routeMz2 == "" || full_routeMz2 != full_routeMz) # Check if the mzml exists if isfile(full_routeMz) && (full_routeMz2 == "" || full_routeMz2 != full_routeMz) # Check if the mzml exists
println("I'm working as intended")
progressPlot=true progressPlot=true
btnPlotDisable=true btnPlotDisable=true
btnStartDisable=true btnStartDisable=true
@ -366,10 +362,12 @@ end
ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure julia returns the freed memory to OS ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure julia returns the freed memory to OS
end end
selectedTab="tab2" selectedTab="tab2"
msg="Plot loaded." fTime=time()
eTime=round(fTime-sTime,digits=3)
msg="Plot loaded in $(eTime) seconds"
full_routeMz2=full_routeMz # To avoid creating the plot if its the same file read as before full_routeMz2=full_routeMz # To avoid creating the plot if its the same file read as before
else else
msg="the mzML file was not found" msg="the mzML file was not found or you're trying to load the same mzML"
warning_msg=true warning_msg=true
end end
else else
@ -383,7 +381,7 @@ end
# Image loaders based on the position of the current image (increment and decrement for both normal and filter) # Image loaders based on the position of the current image (increment and decrement for both normal and filter)
# And a pre-generated list from all image files from /public folder # And a pre-generated list from all image files from /public folder
@onbutton ImgMinus begin @onbutton imgMinus begin
# Append a query string to force the image to refresh # Append a query string to force the image to refresh
timestamp=string(time_ns()) timestamp=string(time_ns())
# Update the array of images listed in the public folder # Update the array of images listed in the public folder
@ -402,7 +400,7 @@ end
text_nmass=replace(text_nmass, ".bmp" => "") text_nmass=replace(text_nmass, ".bmp" => "")
msgimg="Image with the Nmass of $(replace(text_nmass, "_" => "."))" msgimg="Image with the Nmass of $(replace(text_nmass, "_" => "."))"
end end
@onbutton ImgPlus begin @onbutton imgPlus begin
# Append a query string to force the image to refresh # Append a query string to force the image to refresh
timestamp=string(time_ns()) timestamp=string(time_ns())
# Update the array of images listed in the public folder # Update the array of images listed in the public folder
@ -422,7 +420,7 @@ end
msgimg="Image with the Nmass of $(replace(text_nmass, "_" => "."))" msgimg="Image with the Nmass of $(replace(text_nmass, "_" => "."))"
end end
@onbutton ImgMinusT begin @onbutton imgMinusT begin
# Append a query string to force the image to refresh # Append a query string to force the image to refresh
timestamp=string(time_ns()) timestamp=string(time_ns())
new_msi=decrement_image(current_triq, triq_bmp) new_msi=decrement_image(current_triq, triq_bmp)
@ -441,7 +439,7 @@ end
msgtriq="TrIQ image with the Nmass of $(replace(text_nmass, "_" => "."))" msgtriq="TrIQ image with the Nmass of $(replace(text_nmass, "_" => "."))"
end end
@onbutton ImgPlusT begin @onbutton imgPlusT begin
# Append a query string to force the image to refresh # Append a query string to force the image to refresh
timestamp=string(time_ns()) timestamp=string(time_ns())
new_msi=increment_image(current_triq, triq_bmp) new_msi=increment_image(current_triq, triq_bmp)
@ -466,6 +464,7 @@ end
cleaned_imgInt=replace(imgInt, r"\?.*" => "") cleaned_imgInt=replace(imgInt, r"\?.*" => "")
cleaned_imgInt=lstrip(cleaned_imgInt, '/') cleaned_imgInt=lstrip(cleaned_imgInt, '/')
var=joinpath( "./public", cleaned_imgInt ) var=joinpath( "./public", cleaned_imgInt )
sTime=time()
if isfile(var) if isfile(var)
progressPlot=true progressPlot=true
@ -531,7 +530,9 @@ end
ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure julia returns the freed memory to OS ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure julia returns the freed memory to OS
end end
selectedTab="tab4" selectedTab="tab4"
msg="Plot loaded." fTime=time()
eTime=round(fTime-sTime,digits=3)
msg="Plot loaded in $(eTime) seconds"
catch e catch e
msg="Failed to load and process image: $e" msg="Failed to load and process image: $e"
warning_msg=true warning_msg=true
@ -551,6 +552,7 @@ end
cleaned_imgIntT=replace(imgIntT, r"\?.*" => "") cleaned_imgIntT=replace(imgIntT, r"\?.*" => "")
cleaned_imgIntT=lstrip(cleaned_imgIntT, '/') cleaned_imgIntT=lstrip(cleaned_imgIntT, '/')
var=joinpath( "./public", cleaned_imgIntT ) var=joinpath( "./public", cleaned_imgIntT )
sTime=time()
if isfile(var) if isfile(var)
progressPlot=true progressPlot=true
@ -610,7 +612,9 @@ end
ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure julia returns the freed memory to OS ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure julia returns the freed memory to OS
end end
selectedTab="tab4" selectedTab="tab4"
msg="Plot loaded." fTime=time()
eTime=round(fTime-sTime,digits=3)
msg="Plot loaded in $(eTime) seconds"
catch e catch e
msg="Failed to load and process image: $e" msg="Failed to load and process image: $e"
warning_msg=true warning_msg=true
@ -631,6 +635,7 @@ end
cleaned_imgInt=replace(imgInt, r"\?.*" => "") cleaned_imgInt=replace(imgInt, r"\?.*" => "")
cleaned_imgInt=lstrip(cleaned_imgInt, '/') cleaned_imgInt=lstrip(cleaned_imgInt, '/')
var=joinpath("./public", cleaned_imgInt) var=joinpath("./public", cleaned_imgInt)
sTime=time()
if isfile(var) if isfile(var)
progressPlot=true progressPlot=true
@ -676,7 +681,9 @@ end
ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure Julia returns the freed memory to OS ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure Julia returns the freed memory to OS
end end
selectedTab="tab3" selectedTab="tab3"
msg="Plot loaded." fTime=time()
eTime=round(fTime-sTime,digits=3)
msg="Plot loaded in $(eTime) seconds"
catch e catch e
msg="Failed to load and process image: $e" msg="Failed to load and process image: $e"
warning_msg=true warning_msg=true
@ -696,6 +703,7 @@ end
cleaned_imgIntT=replace(imgIntT, r"\?.*" => "") cleaned_imgIntT=replace(imgIntT, r"\?.*" => "")
cleaned_imgIntT=lstrip(cleaned_imgIntT, '/') cleaned_imgIntT=lstrip(cleaned_imgIntT, '/')
var=joinpath("./public", cleaned_imgIntT) var=joinpath("./public", cleaned_imgIntT)
sTime=time()
if isfile(var) if isfile(var)
progressPlot=true progressPlot=true
@ -741,7 +749,9 @@ end
ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure Julia returns the freed memory to OS ccall(:malloc_trim, Int32, (Int32,), 0) # Ensure Julia returns the freed memory to OS
end end
selectedTab="tab3" selectedTab="tab3"
msg="Plot loaded." fTime=time()
eTime=round(fTime-sTime,digits=3)
msg="Plot loaded in $(eTime) seconds"
catch e catch e
msg="Failed to load and process image: $e" msg="Failed to load and process image: $e"
warning_msg=true warning_msg=true
@ -756,7 +766,7 @@ end
btnStartDisable=false btnStartDisable=false
end end
@onbutton CompareBtn begin @onbutton compareBtn begin
CompareDialog=true CompareDialog=true
end end

26
app.jl.html
View File

@ -100,7 +100,7 @@
Loading... Loading...
</template> </template>
</q-btn> </q-btn>
<q-btn id="btnStyle" icon="zoom_out_map" class="q-ma-sm on-right" v-on:click="CompareBtn=true" padding="sm" label="Compare"></q-btn> <q-btn id="btnStyle" icon="zoom_out_map" class="q-ma-sm on-right" v-on:click="compareBtn=true" padding="sm" label="Compare"></q-btn>
</div> </div>
<p>{{msg}}</p> <p>{{msg}}</p>
</div> </div>
@ -115,8 +115,8 @@
<!-- Btn image changer --> <!-- Btn image changer -->
<h6>Image Visualizer</h6> <h6>Image Visualizer</h6>
<div> <div>
<q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="ImgMinus=true"></q-btn> <q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="imgMinus=true"></q-btn>
<q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="ImgPlus=true"></q-btn> <q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="imgPlus=true"></q-btn>
</div> </div>
<!-- Image manager --> <!-- Image manager -->
<div id="image-container" class="row st-col col-12 items-center"> <div id="image-container" class="row st-col col-12 items-center">
@ -135,8 +135,8 @@
<!-- Triq Btn image changer --> <!-- Triq Btn image changer -->
<h6>TrIQ Visualizer</h6> <h6>TrIQ Visualizer</h6>
<div> <div>
<q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="ImgMinusT=true"></q-btn> <q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="imgMinusT=true"></q-btn>
<q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="ImgPlusT=true"></q-btn> <q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="imgPlusT=true"></q-btn>
</div> </div>
<!-- Triq Image manager --> <!-- Triq Image manager -->
<div id="image-container" class="row st-col col-12 items-center"> <div id="image-container" class="row st-col col-12 items-center">
@ -197,8 +197,8 @@
<!-- Content for Tab 0 --> <!-- Content for Tab 0 -->
<!-- Btn image changer --> <!-- Btn image changer -->
<div> <div>
<q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="ImgMinus=true"></q-btn> <q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="imgMinus=true"></q-btn>
<q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="ImgPlus=true"></q-btn> <q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="imgPlus=true"></q-btn>
</div> </div>
<!-- Image manager --> <!-- Image manager -->
<div id="image-container" class="row st-col col-12 items-center"> <div id="image-container" class="row st-col col-12 items-center">
@ -216,8 +216,8 @@
<!-- Content for Tab 1 --> <!-- Content for Tab 1 -->
<!-- Triq Btn image changer --> <!-- Triq Btn image changer -->
<div> <div>
<q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="ImgMinusT=true"></q-btn> <q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="imgMinusT=true"></q-btn>
<q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="ImgPlusT=true"></q-btn> <q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="imgPlusT=true"></q-btn>
</div> </div>
<!-- Triq Image manager --> <!-- Triq Image manager -->
<div id="image-container" class="row st-col col-12 items-center"> <div id="image-container" class="row st-col col-12 items-center">
@ -251,8 +251,8 @@
<!-- Content for Tab 0 --> <!-- Content for Tab 0 -->
<!-- Btn image changer --> <!-- Btn image changer -->
<div> <div>
<q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="ImgMinus=true"></q-btn> <q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="imgMinus=true"></q-btn>
<q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="ImgPlus=true"></q-btn> <q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="imgPlus=true"></q-btn>
</div> </div>
<!-- Image manager --> <!-- Image manager -->
<div id="image-container" class="row st-col col-12 items-center"> <div id="image-container" class="row st-col col-12 items-center">
@ -270,8 +270,8 @@
<!-- Content for Tab 1 --> <!-- Content for Tab 1 -->
<!-- Triq Btn image changer --> <!-- Triq Btn image changer -->
<div> <div>
<q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="ImgMinusT=true"></q-btn> <q-btn id="btnStyle" icon="arrow_back" class="q-my-sm" v-on:click="imgMinusT=true"></q-btn>
<q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="ImgPlusT=true"></q-btn> <q-btn id="btnStyle" icon="arrow_forward" class="q-my-sm on-right" v-on:click="imgPlusT=true"></q-btn>
</div> </div>
<!-- Triq Image manager --> <!-- Triq Image manager -->
<div id="image-container" class="row st-col col-12 items-center"> <div id="image-container" class="row st-col col-12 items-center">

24
ongoing_tasks.txt
View File

@ -1,18 +1,11 @@
PENDING PENDING
Rmsi & julia coherence with image creation and colorbar Rmsi & julia coherence with image creation and colorbar
avoid image enlargement -> CURRENT WIP
image flip upside down
colorbar revamp colorbar revamp
Multiple plot types Create function that makes the imzML from mzML files ?
Tag for time it takes in creating image and creating plots -> CURRENT WIP
Create function that makes the imzML from mzML files
Possibility to add multiple imzML to process at once ? Possibility to add multiple imzML to process at once ?
Pixel selection marks Per pixel of image plot creation for spectra
Multiple spectra plot types
Rotate vertical images Even faster initial boot and subsectuential boot
Easier input for files
TrIQ default values
Comparative for two values
DONE DONE
Quicker start for julia GUI Quicker start for julia GUI
@ -23,4 +16,11 @@ DONE
Code cleanse Code cleanse
better code readability better code readability
Better blind search for images Better blind search for images
3d topography for images 3d topology plots for images
2d contour plots for images
Image flip upside down
Tag for time it takes in creating image and creating plots
Rotate vertical images
Easier input for files
TrIQ default values
Comparative for two views