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minor fixes regarding colorbarplot

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This commit is contained in:
Pixelguy14 2025-01-20 15:39:44 -06:00
parent d18b113641
commit b913bf5117
2 changed files with 7 additions and 9 deletions
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4
Manifest.toml
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@ -390,9 +390,9 @@ version = "1.14.10+0"
[[deps.DelaunayTriangulation]] [[deps.DelaunayTriangulation]]
deps = ["AdaptivePredicates", "EnumX", "ExactPredicates", "Random"] deps = ["AdaptivePredicates", "EnumX", "ExactPredicates", "Random"]
git-tree-sha1 = "e1371a23fd9816080c828d0ce04373857fe73d33" git-tree-sha1 = "5620ff4ee0084a6ab7097a27ba0c19290200b037"
uuid = "927a84f5-c5f4-47a5-9785-b46e178433df" uuid = "927a84f5-c5f4-47a5-9785-b46e178433df"
version = "1.6.3" version = "1.6.4"
[[deps.DelimitedFiles]] [[deps.DelimitedFiles]]
deps = ["Mmap"] deps = ["Mmap"]

12
app.jl
View File

@ -142,7 +142,7 @@ end
showgrid=true showgrid=true
) )
) )
# Dummy 2D surface plot # Dummy 2D scatter plot
traceSpectra=PlotlyBase.scatter(x=[], y=[], mode="lines") traceSpectra=PlotlyBase.scatter(x=[], y=[], mode="lines")
# Create conection to frontend # Create conection to frontend
@out plotdata=[traceSpectra] @out plotdata=[traceSpectra]
@ -234,7 +234,7 @@ end
spectra=LoadImzml(full_route) spectra=LoadImzml(full_route)
msg="File loaded. Creating Spectra with the specific mass and tolerance, please be patient." msg="File loaded. Creating Spectra with the specific mass and tolerance, please be patient."
slice=GetSlice(spectra, Nmass, Tol) slice=GetSlice(spectra, Nmass, Tol)
fig=CairoMakie.Figure(size=(100, 200)) # Container fig=CairoMakie.Figure(size=(120, 220)) # Container
# Append a query string to force the image to refresh # Append a query string to force the image to refresh
timestamp=string(time_ns()) timestamp=string(time_ns())
if triqEnabled # If we have TrIQ if triqEnabled # If we have TrIQ
@ -257,7 +257,7 @@ end
current_triq="TrIQ_$(text_nmass).bmp" current_triq="TrIQ_$(text_nmass).bmp"
msgtriq="TrIQ image with the Nmass of $(replace(text_nmass, "_" => "."))" msgtriq="TrIQ image with the Nmass of $(replace(text_nmass, "_" => "."))"
# Create colorbar # Create colorbar
ticks=round.(range(0, stop=maximum(TrIQ(slice, Int(triqColor), triqProb)), length=10), digits=2) ticks=round.(range(0, stop=maximum(TrIQ(slice, Int(triqColor), triqProb)), length=10), sigdigits=3)
Colorbar(fig[1, 1], colormap=rgb_ViridisPalette, limits=(0, maximum(TrIQ(slice, Int(triqColor), triqProb))),ticks=ticks, label="Intensity") Colorbar(fig[1, 1], colormap=rgb_ViridisPalette, limits=(0, maximum(TrIQ(slice, Int(triqColor), triqProb))),ticks=ticks, label="Intensity")
save("public/colorbar_TrIQ_$(text_nmass).png", fig) save("public/colorbar_TrIQ_$(text_nmass).png", fig)
colorbarT="/colorbar_TrIQ_$(text_nmass).png?t=$(timestamp)" colorbarT="/colorbar_TrIQ_$(text_nmass).png?t=$(timestamp)"
@ -289,7 +289,7 @@ end
current_msi="MSI_$(text_nmass).bmp" current_msi="MSI_$(text_nmass).bmp"
msgimg="Image with the Nmass of $(replace(text_nmass, "_" => "."))" msgimg="Image with the Nmass of $(replace(text_nmass, "_" => "."))"
# Create colorbar # Create colorbar
ticks=round.(range(0, stop=maximum(slice), length=10), digits=2) ticks=round.(range(0, stop=maximum(slice), length=10), sigdigits=3)
Colorbar(fig[1, 1], colormap=rgb_ViridisPalette, limits=(0, maximum(slice)),ticks=ticks, label="Intensity") Colorbar(fig[1, 1], colormap=rgb_ViridisPalette, limits=(0, maximum(slice)),ticks=ticks, label="Intensity")
save("public/colorbar_MSI_$(text_nmass).png", fig) save("public/colorbar_MSI_$(text_nmass).png", fig)
colorbar="/colorbar_MSI_$(text_nmass).png?t=$(timestamp)" colorbar="/colorbar_MSI_$(text_nmass).png?t=$(timestamp)"
@ -663,7 +663,6 @@ end
title="2D Topographic Map", title="2D Topographic Map",
xaxis_title="X", xaxis_title="X",
yaxis_title="Y" yaxis_title="Y"
) )
traceContour=PlotlyBase.contour( traceContour=PlotlyBase.contour(
z=elevation_smoothed, z=elevation_smoothed,
@ -730,8 +729,7 @@ end
layoutContour=PlotlyBase.Layout( layoutContour=PlotlyBase.Layout(
title="2D Topographic Map", title="2D Topographic Map",
xaxis_title="X", xaxis_title="X",
yaxis_title="Y", yaxis_title="Y"
) )
traceContour=PlotlyBase.contour( traceContour=PlotlyBase.contour(
z=elevation_smoothed, z=elevation_smoothed,